| |
|
|
| Registros recuperados : 77 | |
| 2. |  | MAZONI, I.; NESHICH, G. DIPN: a dictionary of the internal proteins nanoenvironments and their potential for transformation into agricultural assets. In: MASSRUHÁ, S. M. F. S.; LEITE, M. A. de A.; OLIVEIRA, S. R. de M.; MEIRA, C. A. A.; LUCHIARI JUNIOR, A.; BOLFE, E. L. (ed.). Digital agriculture: research, development and innovation in production chains. Brasília, DF: Embrapa, 2023. cap. 9, p. 165-177.| Biblioteca(s): Embrapa Agricultura Digital. |
|    |
| 3. | | MAZONI, I.; NESHICH, G. DPIN: um dicionário dos nanoambientes internos das proteínas e seu potencial para transformação em ativos para a agricultura. In: MASSRUHÁ, S. M. F. S.; LEITE, M. A. de A.; OLIVEIRA, S. R. de M.; MEIRA, C. A. A.; LUCHIARI JUNIOR, A.; BOLFE, E. L. (Ed.). Agricultura digital: pesquisa, desenvolvimento e inovação nas cadeias produtivas. Brasília, DF: Embrapa, 2020. cap. 9, p. 218-232.| Biblioteca(s): Embrapa Agricultura Digital. |
| |
| 10. | | MELO, R. C.; MAZONI, I.; NESHICH, G.; SANTORO, M. M.; MEIRA JÚNIOR, W. Contacts as the key elements for comparing two protein structures. In: ANNUAL INTERNATIONAL CONFERENCE ON INTELLIGENT SYSTEMS FOR MOLECULAR BIOLOGY, 14.; ANNUAL AB3C CONFERENCE, 2., 2006, Fortaleza. Conference Program... Fortaleza: ISCB, 2006. Não paginado. ISMB, X-MEETING 2006. Poster I-6.| Biblioteca(s): Embrapa Agricultura Digital. |
| |
| 11. | | PENA, I.; MANCINI, A. L.; MAZONI, I.; JARDINE, J. G.; NESHICH, G.; ORTEGA, J. M. Identification of philogenetic relationship between GDPD and SMaseD proteins based on active site amino acid physical chemical properties. In: INTERNATIONAL CONFERENCE OF BRAZILIAN ASSOCIATION FOR BIOINFORMATICS AND COMPUTATIONAL BIOLOGY, 4., 2008, Salvador. Proceedings... Salvador: AB³C, 2008. Não paginado. X-Meeting 2008.| Biblioteca(s): Embrapa Agricultura Digital. |
|  |
| 12. | | NESHICH, G.; JARDINE, J. G.; BERNARDES, R.; MAZONI, I.; MANCINI, A. L.; SILVEIRA, C. da. "Cloud computation" na forma de serviços WEB para um banco de dados federativo STING_RDB. In: SIMPÓSIO SOBRE INOVAÇÃO E CRIATIVIDADE CIENTÍFICA NA EMBRAPA, 1., 2008, Brasília, DF. Comunicações Selecionadas. Brasília, DF: Embrapa, 2008. Não paginado.| Biblioteca(s): Embrapa Agricultura Digital. |
| |
| 14. | | MAZONI, I.; JARDINE, J. G.; BORRO, L. C.; ALVARENGA, D.; NESHICH, G. Electrostatic potential at the alpha carbon atoms along the alpha helices and beta strands. In: ANNUAL MEETING OF SBBQ, 37.; CONGRESS OF THE PAN-AMERICAN ASSOCIATION FOR BIOCHEMISTRY AND MOLECULAR BIOLOGY, 11, 2008, Águas de Lindóia. Program and index... Águas de Lindóia, Program and index... Águas de Lindóia: SBBq, 2008. Não paginado. PABMB.| Biblioteca(s): Embrapa Agricultura Digital. |
| |
| 16. | | BORRO, L. C.; SALIM, J. A.; MAZONI, I.; YANO, I.; JARDINE, J. G.; NESHICH, G. Improving binding affinity prediction by using a rule-based model with physical-chemical and structural descriptors of the nano-environment for protein-ligand interactions. In: CONGRESS OF THE INTERNATIONAL UNION FOR BIOCHEMISTRY AND MOLECULAR BIOLOGY, 23.; ANNUAL MEETING OF THE BRAZILIAN SOCIETY FOR BIOCHEMISTRY AND MOLECULAR BIOLOGY, 44., 2015, Foz do Iguaçu. Biochemistry for a better world: abstracts book. [Foz do Iguaçu]: SBBq, 2015. p. 153. C.047.| Biblioteca(s): Embrapa Agricultura Digital. |
| |
| 17. | | SALIM, J. A.; BORRO, L.; MAZONI, I.; YANO, I. H.; JARDINE, J. G.; NESHICH, G. Multiple structure single parameter: analysis of a single protein nano environment descriptor characterizing a shared loci on structurally aligned proteins. Bioinformatics, v. 32, n. 12, p. 1885-1887, 2016.| Biblioteca(s): Embrapa Agricultura Digital. |
| |
| 19. | | JARDINE, J. G.; MAZONI, I.; BORRO, L. C.; ALVARENGA, D.; NESHICH, G. Signature contact coordination patterns for secondary structure elements in protein structures. In: ANNUAL MEETING OF SBBQ, 37.; CONGRESS OF THE PAN-AMERICAN ASSOCIATION FOR BIOCHEMISTRY AND MOLECULAR BIOLOGY, 11, 2008, Águas de Lindóia. Program and index... Águas de Lindóia: SBBq, 2008. Não paginado. PABMB.| Biblioteca(s): Embrapa Agricultura Digital. |
| |
| 20. | | MELO, R. C.; MAZONI, I.; NESHICH, G.; SANTORO, M. M.; MEIRA JUNIOR, W. Protein structure topology comparison based on contact maps. In: ANNUAL INTERNATIONAL CONFERENCE ON INTELLIGENT SYSTEMS FOR MOLECULAR BIOLOGY, 14.; ANNUAL AB3C CONFERENCE, 2., 2006, Fortaleza. Conference Program... Fortaleza: ISCB, 2006. Não paginado. ISMB, X-MEETING 2006. Poster I-5.| Biblioteca(s): Embrapa Agricultura Digital. |
| |
| Registros recuperados : 77 | |
|
|
|
 | Acesso ao texto completo restrito à biblioteca da Embrapa Agricultura Digital. Para informações adicionais entre em contato com cnptia.biblioteca@embrapa.br. |
Registro Completo
|
Biblioteca(s): |
Embrapa Agricultura Digital. |
|
Data corrente: |
03/03/2017 |
|
Data da última atualização: |
03/03/2017 |
|
Tipo da produção científica: |
Software |
|
Autoria: |
MAZONI, I.; YANO, I. H.; NESHICH, G.; BORRO, L. C. |
|
Afiliação: |
IVAN MAZONI, CNPTIA; INÁCIO HENRIQUE YANO, CNPTIA; GORAN NESHICH, CNPTIA; LUIZ CÉSAR BORRO, Unicamp. |
|
Título: |
PS3DV. Versão 1. |
|
Ano de publicação: |
2016 |
|
Fonte/Imprenta: |
Campinas: Embrapa Informática Agropecuária, 2016. |
|
Idioma: |
Inglês |
|
Conteúdo: |
PS3DV is an acronym for Protein Secondary Structure STING Descriptor Viewer, the new software to analyze the nano environment of Protein Secondary Structure Elements (PSSE). The PS3DV offers to a user to analyze a set of STING descriptor plots obtained to accompany nano environments of alpha helices (later, we will have beta strands and turns) in two different ways: exclusive alpha helices (a single helical structure in background of protein total structure) and non-exclusive alpha helices (more than one helix is present per protein analyzed). Users can select any image and keep viewing through a carousel of more than one thousandt of images (combinations of size of the PSSE and multitude of protein descriptors drawn from STING DB). The plots were produced using R package with high image quality and may be saved by the user for posterior analyzis. PS3DV was developed in HTML5 integrated with JS, also using jQuery and Bootstrap technologies. PS3DV can be accessed at http://lbcs029.cnptia.embrapa.br/ps3dv/ |
|
Thesaurus NAL: |
Computer software. |
|
Categoria do assunto: |
X Pesquisa, Tecnologia e Engenharia |
|
Marc: |
LEADER 01428nam a2200157 a 4500
001 2066027
005 2017-03-03
008 2016 bl uuuu u0uu1 u #d
100 1 $aMAZONI, I.
245 $aPS3DV. Versão 1.$h[electronic resource]
260 $aCampinas: Embrapa Informática Agropecuária$c2016
520 $aPS3DV is an acronym for Protein Secondary Structure STING Descriptor Viewer, the new software to analyze the nano environment of Protein Secondary Structure Elements (PSSE). The PS3DV offers to a user to analyze a set of STING descriptor plots obtained to accompany nano environments of alpha helices (later, we will have beta strands and turns) in two different ways: exclusive alpha helices (a single helical structure in background of protein total structure) and non-exclusive alpha helices (more than one helix is present per protein analyzed). Users can select any image and keep viewing through a carousel of more than one thousandt of images (combinations of size of the PSSE and multitude of protein descriptors drawn from STING DB). The plots were produced using R package with high image quality and may be saved by the user for posterior analyzis. PS3DV was developed in HTML5 integrated with JS, also using jQuery and Bootstrap technologies. PS3DV can be accessed at http://lbcs029.cnptia.embrapa.br/ps3dv/
650 $aComputer software
700 1 $aYANO, I. H.
700 1 $aNESHICH, G.
700 1 $aBORRO, L. C.
Download
Esconder MarcMostrar Marc Completo |
|
Registro original: |
Embrapa Agricultura Digital (CNPTIA) |
|
|
Biblioteca |
ID |
Origem |
Tipo/Formato |
Classificação |
Cutter |
Registro |
Volume |
Status |
Fechar
|
| Nenhum registro encontrado para a expressão de busca informada. |
|
|
